Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORV20320.1TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
ORV20259.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.914
ORV27771.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
ORV30337.1
Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.739
ORV29803.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.728
ORV20260.1
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.704
ORV27770.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.703
ORV29559.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.683
ORV34290.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.682
ORV27760.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.678
ORV27821.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
Your Current Organism:
Mycolicibacterium confluentis
NCBI taxonomy Id: 28047
Other names: ATCC 49920, CIP 105510, DSM 44017, JCM 13671, M. confluentis, Mycobacterium confluentis
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