STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORV31262.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (281 aa)    
Predicted Functional Partners:
ORV27019.1
3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.957
ORV21252.1
DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.835
ORV20607.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.830
ORV29680.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.830
AWB99_23405
Acyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.830
ORV25979.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.816
ORV31165.1
Phosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.806
ORV28372.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.802
ORV34834.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.796
ORV23650.1
Menaquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.796
Your Current Organism:
Mycolicibacterium confluentis
NCBI taxonomy Id: 28047
Other names: ATCC 49920, CIP 105510, DSM 44017, JCM 13671, M. confluentis, Mycobacterium confluentis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.