Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ORV22945.1Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family. (400 aa)    
Predicted Functional Partners:
ORV24801.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.834
AWB99_26320
Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the cytochrome P450 family.
  
     0.774
ORV28338.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.730
ORV20607.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.711
ORV29680.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.711
AWB99_23405
Acyltransferase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.711
ORV31458.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.610
ORV28304.1
Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.588
ORV29785.1
Electron transfer flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.587
ORV22944.1
C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.579
Your Current Organism:
Mycolicibacterium confluentis
NCBI taxonomy Id: 28047
Other names: ATCC 49920, CIP 105510, DSM 44017, JCM 13671, M. confluentis, Mycobacterium confluentis
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