STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sspC2SSP-3. (73 aa)    
Predicted Functional Partners:
CUQ75406.1
Sporulation protein YqfD.
 
     0.717
CUQ73966.1
Sporulation protein YabP.
  
     0.711
CUQ74575.1
Stage II sporulation protein P.
  
     0.698
gpr
Germination protease precursor; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
  
 0.685
CUQ75690.1
SpoIIIAH-like protein.
  
   
 0.670
CUQ75691.1
Stage III sporulation protein AG.
  
   
 0.660
spoVAD
Stage V sporulation protein AD.
  
  
 0.632
CUQ74204.1
Stage V sporulation protein AE.
  
     0.629
CUQ76876.1
Uncharacterized protein conserved in bacteria.
  
    0.615
CUQ75695.1
Stage III sporulation protein AC.
  
     0.594
Your Current Organism:
Lachnospira pectinoschiza
NCBI taxonomy Id: 28052
Other names: ATCC 49827, L. pectinoschiza, strain 150-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.