STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
btuCVitamin B12 import system permease protein BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (337 aa)    
Predicted Functional Partners:
yusV_1
Probable siderophore transport system ATP-binding protein YusV.
 0.999
CUQ75054.1
ABC-type Fe3+-citrate transport system%2C periplasmic component.
 
 0.996
yusV_2
Probable siderophore transport system ATP-binding protein YusV.
 0.989
fhuC_2
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 0.983
CUQ77628.1
Corrinoid ABC transporter substrate-binding protein.
 
 0.971
feuA
Iron-uptake system-binding protein precursor.
 
 0.947
fhuC_1
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
 
 0.781
cbiC
Cobalt-precorrin-8X methylmutase.
       0.757
cbiD
cobalt-precorrin-6A synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.
       0.757
cbiT
Probable cobalt-precorrin-6Y C(15)-methyltransferase [decarboxylating].
  
  
 0.615
Your Current Organism:
Lachnospira pectinoschiza
NCBI taxonomy Id: 28052
Other names: ATCC 49827, L. pectinoschiza, strain 150-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.