STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ75694.1Stage III sporulation protein AD. (126 aa)    
Predicted Functional Partners:
CUQ75695.1
Stage III sporulation protein AC.
 
  
 0.992
spoIIIAE
Stage III sporulation protein AE precursor.
 
  
 0.990
CUQ75697.1
Transcription termination factor Rho.
 
  
 0.966
CUQ75696.1
Stage III sporulation protein SpoAB.
 
  
 0.958
CUQ75691.1
Stage III sporulation protein AG.
 
  
 0.871
CUQ75690.1
SpoIIIAH-like protein.
 
  
 0.859
spoIVA
Stage IV sporulation protein A.
  
    0.769
spoIIID
14 kDa transcription factor.
  
    0.748
CUQ75406.1
Sporulation protein YqfD.
  
     0.743
spoIIE
Stage II sporulation protein E.
  
     0.734
Your Current Organism:
Lachnospira pectinoschiza
NCBI taxonomy Id: 28052
Other names: ATCC 49827, L. pectinoschiza, strain 150-1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.