STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ75874.1Predicted acetyltransferase. (174 aa)    
Predicted Functional Partners:
yaiI_1
Uncharacterized BCR%2C YaiI/YqxD family COG1671; Belongs to the UPF0178 family.
       0.727
CUQ75877.1
Uncharacterised protein.
       0.576
yheI
Probable multidrug resistance ABC transporter ATP-binding/permease protein YheI.
       0.548
ydiC
UGMP family protein.
  
 0.546
pat
Phosphinothricin N-acetyltransferase.
 
 
 0.511
CUQ75879.1
Uncharacterised protein.
       0.481
immR
HTH-type transcriptional regulator immR.
    
  0.477
CUQ77364.1
Uncharacterised protein.
 
  
 0.461
arnB_1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.438
gcp
t(6)A37 threonylcarbamoyladenosine biosynthesis protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
  
 
 0.420
Your Current Organism:
Lachnospira pectinoschiza
NCBI taxonomy Id: 28052
Other names: ATCC 49827, L. pectinoschiza, strain 150-1
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