STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUQ77723.1PEGA domain. (480 aa)    
Predicted Functional Partners:
CUQ76513.1
Uncharacterised protein.
  
   0.814
cca
CCA-adding enzyme.
      0.748
arnB_1
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.656
CUQ77721.1
Spore coat protein%2C CotS family.
  
    0.633
capD
UDP-glucose 4-epimerase.
  
    0.555
wcaJ_3
Putative colanic biosynthesis UDP-glucose lipid carrier transferase.
  
    0.553
icaA_2
Poly-beta-1%2C6-N-acetyl-D-glucosamine synthase.
       0.553
ribBA
Riboflavin biosynthesis protein ribBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
    
  0.525
CUQ77729.1
Glycogen synthase.
       0.506
CUQ77730.1
glycosyltransferase%2C GG-Bacteroidales peptide system.
       0.493
Your Current Organism:
Lachnospira pectinoschiza
NCBI taxonomy Id: 28052
Other names: ATCC 49827, L. pectinoschiza, strain 150-1
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