STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gspA_2General stress protein A. (320 aa)    
Predicted Functional Partners:
metH_2
Methionine synthase.
  
 
  0.806
CUQ74271.1
Lipopolysaccharide 1%2C3-galactosyltransferase.
 
  
  0.803
CUQ74273.1
1-acylglycerol-3-phosphate O-acyltransferases.
 
     0.666
CUQ77842.1
Uncharacterized protein conserved in bacteria.
  
    0.656
CUQ74270.1
Uncharacterised protein.
 
     0.642
metF
5%2C10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
  
 
  0.592
gmhB
D%2CD-heptose 1%2C7-bisphosphate phosphatase.
    
 0.578
gspA_1
General stress protein A.
 
  
 
0.528
CUQ77844.1
Uncharacterized protein conserved in bacteria.
  
    0.488
Your Current Organism:
Lachnospira pectinoschiza
NCBI taxonomy Id: 28052
Other names: ATCC 49827, L. pectinoschiza, strain 150-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.