STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OOV06092.1Chlorophyll synthesis pathway protein BchC; Derived by automated computational analysis using gene prediction method: Protein Homology. (317 aa)    
Predicted Functional Partners:
OOV06089.1
Chlorophyllide a reductase subunit Z; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
OOV06090.1
Chlorophyllide a reductase subunit Y; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.993
OOV06091.1
Chlorophyllide a reductase iron protein subunit X; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NifH/BchL/ChlL family.
 
 
 0.993
OOV06065.1
2-vinyl bacteriochlorophyllide hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.975
OOV06062.1
Bacteriochlorophyll/chlorophyll a synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.968
OOV08989.1
Pyruvate ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.963
OOV06093.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.962
OOV06058.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.941
OOV06088.1
Light-harvesting protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
 
   
 0.906
OOV08892.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.897
Your Current Organism:
Rhodoferax fermentans
NCBI taxonomy Id: 28066
Other names: ATCC 49787, DSM 10138, IFO 16659, JCM 7819, NBRC 16659, R. fermentans, strain FR2
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