STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMA066CDNA repair protein SMC6. (1183 aa)    
Predicted Functional Partners:
CYME_CMQ181C
Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids.
   
 0.999
CYME_CMH246C
Probable DNA repair protein SPR18.
  
0.999
CYME_CMA008C
ORF1050.
   
 0.987
CYME_CML027C
Structural maintenance of chromosomes protein.
  
 0.911
CYME_CMM284C
Similar to DNA-damage-inducible protein P.
  
 0.873
CYME_CMO331C
Sister-chromatide cohesion complex Cohesin, subunit SA.
   
 0.863
CYME_CML313C
Similar to ATP-dependent RNA helicase.
   
 
 0.797
CYME_CME004C
Ubiquitin-like protein Smt3.
   
 0.785
CYME_CMF069C
Chromosome assembly complex Condensin I, subunit H.
   
 0.777
CYME_CMQ352C
Uncharacterized protein.
   
 0.770
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.