STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMD077CSimilar to methionine--tRNA ligase, partial. (404 aa)    
Predicted Functional Partners:
CYME_CMC083C
Glutamate--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.999
CYME_CMS289C
Glutamine--tRNA ligase, chloroplast or mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 0.999
CYME_CMN177C
Arginine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
CYME_CMQ336C
Leucyl--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
CYME_CMT280C
Isoleucine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.999
CYME_CMP345C
Valine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.998
CYME_CMS024C
Prolyl-tRNA synthetase.
  
 0.997
CYME_CMI094C
Methionine--tRNA ligase, cytoplasmic; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
 
 0.997
CYME_CMJ098C
Proline--tRNA ligase.
  
 0.997
CYME_CMI042C
Tyrosine--tRNA ligase.
  
0.996
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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