STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMH241CUncharacterized protein. (559 aa)    
Predicted Functional Partners:
CYME_CMM180C
CLP1_P domain-containing protein.
   
 0.998
CYME_CMS030C
Uncharacterized protein.
   
 0.736
CYME_CMK256C
WD_REPEATS_REGION domain-containing protein.
   
 0.736
CYME_CMP117C
Block of proliferation 1.
   
  0.705
CYME_CMT105C
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
  0.685
CYME_CMD030C
Uncharacterized protein.
   
 
  0.670
CYME_CMQ071C
Probable U3 snoRNP component Imp4p.
   
 
  0.625
CYME_CMF073C
Probable high-affinity potassium transporter.
    
  0.617
CYME_CMM297C
ULP_PROTEASE domain-containing protein.
   
 0.616
CYME_CML324C
Similar to SUMO-1-specific protease.
   
 0.616
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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