STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMJ161CUncharacterized protein. (148 aa)    
Predicted Functional Partners:
CYME_CMQ351C
Uncharacterized protein.
    
 0.998
CYME_CMC092C
Methyltransf_11 domain-containing protein.
   
 0.996
CYME_CMT343C
Uncharacterized protein.
   
 0.994
CYME_CMT030C
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.985
CYME_CMO333C
UPF0020 domain-containing protein.
   
 0.939
CYME_CMJ198C
Similar to protoporphyrinogen oxidase HemK.
    
 0.898
CYME_CMN180C
Similar to methyl transferase.
    
 
 0.855
CYME_CMJ080C
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
   
 
 0.797
CYME_CMM111C
Eukaryotic petide chain release factor eRF subunit 1.
   
 0.760
CYME_CMN132C
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
   0.750
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.