STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMM068CCitrate synthase; Belongs to the citrate synthase family. (665 aa)    
Predicted Functional Partners:
CYME_CMT561C
Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family.
  
 0.979
CYME_CMK098C
Acetyl-coenzyme A synthetase.
  
 0.955
CYME_CMB128C
ATP citrate lyase.
  
 0.950
CYME_CMB118C
ATP citrate lyase.
  
 0.950
CYME_CMP193C
Malate dehydrogenase, mitochondrial.
  
 0.947
CYME_CMT611C
Malate dehydrogenase, cytoplasmic; Belongs to the LDH/MDH superfamily.
  
 0.947
CYME_CMI273C
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.941
CYME_CMN233C
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.941
CYME_CMN017C
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
  
 0.941
CYME_CMA042C
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.933
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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