STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMN165CHistone H3; Belongs to the histone H3 family. (136 aa)    
Predicted Functional Partners:
CYME_CMH192C
Uncharacterized protein.
    
 0.999
CYME_CMN166C
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
 
 
 0.978
CYME_CMN145C
Histone H2B; Belongs to the histone H2B family.
 
 
 0.959
CYME_CMR457C
Histone H2A; Belongs to the histone H2A family.
 
 
 0.912
CYME_CMN263C
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
 0.900
CYME_CMG025C
Uncharacterized protein.
   
 0.893
CYME_CMJ008C
Similar to retinoblastoma-binding protein 5.
    
 0.879
CYME_CMH027C
Similar to transcriptional activator FHA1.
   
 0.873
CYME_CMQ044C
Aurora kinase; Belongs to the protein kinase superfamily.
 
 
 
 0.851
CYME_CML074C
Similar to trithorax protein ash2.
    
 0.838
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.