Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYME_CME179C | CYME_CMN258C | M1V4H9 | M1UU48 | Dihydrodipicolinate synthase. | Dihydrodipicolinate reductase. | 0.918 |
CYME_CME179C | CYME_CMQ230C | M1V4H9 | M1VKP9 | Dihydrodipicolinate synthase. | Diaminopimelate epimerase. | 0.421 |
CYME_CMN258C | CYME_CME179C | M1UU48 | M1V4H9 | Dihydrodipicolinate reductase. | Dihydrodipicolinate synthase. | 0.918 |
CYME_CMN258C | CYME_CMN323C | M1UU48 | M1VEP9 | Dihydrodipicolinate reductase. | Probable aspartate aminotransferase. | 0.900 |
CYME_CMN258C | CYME_CMQ230C | M1UU48 | M1VKP9 | Dihydrodipicolinate reductase. | Diaminopimelate epimerase. | 0.414 |
CYME_CMN323C | CYME_CMN258C | M1VEP9 | M1UU48 | Probable aspartate aminotransferase. | Dihydrodipicolinate reductase. | 0.900 |
CYME_CMN323C | CYME_CMQ230C | M1VEP9 | M1VKP9 | Probable aspartate aminotransferase. | Diaminopimelate epimerase. | 0.919 |
CYME_CMQ230C | CYME_CME179C | M1VKP9 | M1V4H9 | Diaminopimelate epimerase. | Dihydrodipicolinate synthase. | 0.421 |
CYME_CMQ230C | CYME_CMN258C | M1VKP9 | M1UU48 | Diaminopimelate epimerase. | Dihydrodipicolinate reductase. | 0.414 |
CYME_CMQ230C | CYME_CMN323C | M1VKP9 | M1VEP9 | Diaminopimelate epimerase. | Probable aspartate aminotransferase. | 0.919 |