STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMR169CRanBD1 domain-containing protein. (572 aa)    
Predicted Functional Partners:
CYME_CMT257C
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.911
CYME_CMG035C
Probable Ran GTPase activating protein.
   
 0.904
CYME_CMB112C
Similar to nucleoporin.
   
 0.896
CYME_CMR125C
Similar to nucleoporin complex subunit.
   
 0.894
CYME_CMH179C
Similar to nucleoporin 155kD.
   
 0.853
CYME_CMC129C
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.823
CYME_CMP228C
Nsp1_C domain-containing protein.
   
 0.802
CYME_CMO056C
Probable importin beta protein.
   
 0.778
CYME_CMK193C
Smt3-conjugating enzyme E2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.765
CYME_CMO203C
Uncharacterized protein.
    
 0.761
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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