STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMA083CUncharacterized protein. (546 aa)    
Predicted Functional Partners:
CYME_CMT160C
60S ribosomal protein L24 homolog.
   
 
 0.868
CYME_CMC134C
Probable constituent of 66S pre-ribosomal particles Nsa2p.
   
 
 0.850
CYME_CMT105C
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.845
CYME_CMS390C
Probable essential nucleolar protein required for biogenesis of the 60S ribosomal subunit Brx1p.
   
 
 0.832
CYME_CMQ057C
Brix domain-containing protein.
   
 
 0.832
CYME_CMO190C
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
 
 0.815
CYME_CMP117C
Block of proliferation 1.
   
 
 0.801
CYME_CMI122C
Similar to RNA-binding protein with RRM.
   
 
 0.799
CYME_CMO200C
Similar to nucleolar ribosome transport complex component Noc2p.
   
   0.797
CYME_CMT341C
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.795
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.