STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMJ171CUncharacterized protein. (591 aa)    
Predicted Functional Partners:
CYME_CML034C
Similar to vesicle docking protein SEC34.
    
 0.997
CYME_CMJ219C
Similar to component of oligomeric golgi complex 4.
   
 0.996
CYME_CMS059C
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.995
CYME_CMR262C
Similar to conserved oligomeric Golgi complex component COG2.
    
 0.977
CYME_CMH010C
Similar to syntaxin protein; Belongs to the syntaxin family.
    
 0.818
CYME_CMN143C
Similar to t-SNARE SED5; Belongs to the syntaxin family.
    
 0.810
CYME_CMR200C
Similar to Golgi associated retrograde protein complex component VPS53.
   
 
 0.791
CYME_CMS023C
Similar to Golgi associated retrograde protein complex component VPS52.
   
 0.789
CYME_CMF155C
Vps54 domain-containing protein.
    
 0.785
CYME_CMQ122C
Small GTP-binding protein of Rab family, Rab6.
    
 0.779
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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