CYME_CMN146C protein (Cyanidioschyzon merolae)

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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Score

CYME_CMN146C

AD domain-containing protein. (208 aa)

Predicted Functional Partners:

CYME_CMK070C

0.988

CYME_CML140C

0.784

LSM1

0.505

CYME_CMB130C

0.457

LSM3

0.456

CYME_CMP206C

0.431

CYME_CMK022C

0.420

LSM5

0.414

CYME_CMR410C

0.408

Your Current Organism:

Cyanidioschyzon merolae

NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CYME_CMB130C	CYME_CMK022C	M1VEK0	M1V5C3	SnRNP core Sm-like protein SmX5.	Similar to Sm protein B.	0.960
CYME_CMB130C	CYME_CML140C	M1VEK0	M1VDC7	SnRNP core Sm-like protein SmX5.	RNA helicase.	0.810
CYME_CMB130C	CYME_CMN146C	M1VEK0	M1V5U3	SnRNP core Sm-like protein SmX5.	AD domain-containing protein.	0.457
CYME_CMB130C	CYME_CMP206C	M1VEK0	M1V655	SnRNP core Sm-like protein SmX5.	Similar to U6 snRNA-associated Sm-like protein LSm7.	0.999
CYME_CMB130C	LSM1	M1VEK0	M1VMM6	SnRNP core Sm-like protein SmX5.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
CYME_CMB130C	LSM3	M1VEK0	M1VI86	SnRNP core Sm-like protein SmX5.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
CYME_CMB130C	LSM5	M1VEK0	M1UV61	SnRNP core Sm-like protein SmX5.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
CYME_CMK022C	CYME_CMB130C	M1V5C3	M1VEK0	Similar to Sm protein B.	SnRNP core Sm-like protein SmX5.	0.960
CYME_CMK022C	CYME_CMK070C	M1V5C3	M1VHQ2	Similar to Sm protein B.	LsmAD domain-containing protein.	0.966
CYME_CMK022C	CYME_CMN146C	M1V5C3	M1V5U3	Similar to Sm protein B.	AD domain-containing protein.	0.420
CYME_CMK022C	CYME_CMP206C	M1V5C3	M1V655	Similar to Sm protein B.	Similar to U6 snRNA-associated Sm-like protein LSm7.	0.917
CYME_CMK022C	LSM1	M1V5C3	M1VMM6	Similar to Sm protein B.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.532
CYME_CMK022C	LSM3	M1V5C3	M1VI86	Similar to Sm protein B.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.989
CYME_CMK022C	LSM5	M1V5C3	M1UV61	Similar to Sm protein B.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.916
CYME_CMK070C	CYME_CMK022C	M1VHQ2	M1V5C3	LsmAD domain-containing protein.	Similar to Sm protein B.	0.966
CYME_CMK070C	CYME_CML140C	M1VHQ2	M1VDC7	LsmAD domain-containing protein.	RNA helicase.	0.844
CYME_CMK070C	CYME_CMN146C	M1VHQ2	M1V5U3	LsmAD domain-containing protein.	AD domain-containing protein.	0.988
CYME_CML140C	CYME_CMB130C	M1VDC7	M1VEK0	RNA helicase.	SnRNP core Sm-like protein SmX5.	0.810
CYME_CML140C	CYME_CMK070C	M1VDC7	M1VHQ2	RNA helicase.	LsmAD domain-containing protein.	0.844
CYME_CML140C	CYME_CMN146C	M1VDC7	M1V5U3	RNA helicase.	AD domain-containing protein.	0.784