STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMS060CBms1-type G domain-containing protein. (1205 aa)    
Predicted Functional Partners:
CYME_CMQ312C
Uncharacterized protein.
   
 0.999
CYME_CMT444C
WD_REPEATS_REGION domain-containing protein.
   
 0.998
CYME_CMH278C
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.998
CYME_CMO109C
Pre-rRNA processing protein bystin.
  
 
 0.998
CYME_CMO193C
Uncharacterized protein.
   
 0.998
CYME_CMP003C
NUC153 domain-containing protein.
   
 
 0.998
CYME_CMT453C
Similar to nucleolar RNA-associated protein NRAP.
   
 0.998
CYME_CMG105C
Probable WD-repeat membrane protein.
   
 
 0.997
CYME_CMI018C
Similar to U3 snoRNP component Utp14p.
   
 
 0.997
CYME_CMB019C
Similar to U3 snoRNP component Mpp10.
   
 
 0.997
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.