Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYME_CMD031C | CYME_CMT375C | M1VAH6 | M1V7S4 | Probable arginine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. | Uncharacterized protein. | 0.497 |
CYME_CMD046C | CYME_CML140C | M1VAI3 | M1VDC7 | FHA domain-containing protein. | RNA helicase. | 0.660 |
CYME_CMD046C | CYME_CMT375C | M1VAI3 | M1V7S4 | FHA domain-containing protein. | Uncharacterized protein. | 0.737 |
CYME_CMJ115C | CYME_CML140C | M1V824 | M1VDC7 | NTP_transf_9 domain-containing protein. | RNA helicase. | 0.843 |
CYME_CMJ115C | CYME_CMM070C | M1V824 | M1VIK3 | NTP_transf_9 domain-containing protein. | Probable mRNA-decapping enzyme complex component DCP1. | 0.901 |
CYME_CMJ115C | CYME_CMT375C | M1V824 | M1V7S4 | NTP_transf_9 domain-containing protein. | Uncharacterized protein. | 0.704 |
CYME_CMJ115C | LSM1 | M1V824 | M1VMM6 | NTP_transf_9 domain-containing protein. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.763 |
CYME_CMJ226C | CYME_CML140C | M1V864 | M1VDC7 | mRNA-decapping enzyme complex component DCP2. | RNA helicase. | 0.843 |
CYME_CMJ226C | CYME_CMM070C | M1V864 | M1VIK3 | mRNA-decapping enzyme complex component DCP2. | Probable mRNA-decapping enzyme complex component DCP1. | 0.901 |
CYME_CMJ226C | CYME_CMT375C | M1V864 | M1V7S4 | mRNA-decapping enzyme complex component DCP2. | Uncharacterized protein. | 0.704 |
CYME_CMJ226C | LSM1 | M1V864 | M1VMM6 | mRNA-decapping enzyme complex component DCP2. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.763 |
CYME_CMJ286C | CYME_CMK086C | M1VHK4 | M1US47 | Polyadenylate-binding protein. | Uncharacterized protein. | 0.531 |
CYME_CMJ286C | CYME_CML140C | M1VHK4 | M1VDC7 | Polyadenylate-binding protein. | RNA helicase. | 0.759 |
CYME_CMJ286C | CYME_CMM070C | M1VHK4 | M1VIK3 | Polyadenylate-binding protein. | Probable mRNA-decapping enzyme complex component DCP1. | 0.687 |
CYME_CMJ286C | CYME_CMT375C | M1VHK4 | M1V7S4 | Polyadenylate-binding protein. | Uncharacterized protein. | 0.632 |
CYME_CMJ286C | LSM1 | M1VHK4 | M1VMM6 | Polyadenylate-binding protein. | U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. | 0.590 |
CYME_CMK086C | CYME_CMJ286C | M1US47 | M1VHK4 | Uncharacterized protein. | Polyadenylate-binding protein. | 0.531 |
CYME_CMK086C | CYME_CML140C | M1US47 | M1VDC7 | Uncharacterized protein. | RNA helicase. | 0.646 |
CYME_CMK086C | CYME_CMT375C | M1US47 | M1V7S4 | Uncharacterized protein. | Uncharacterized protein. | 0.518 |
CYME_CML140C | CYME_CMD046C | M1VDC7 | M1VAI3 | RNA helicase. | FHA domain-containing protein. | 0.660 |
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