STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMK163CDerlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (223 aa)    
Predicted Functional Partners:
CYME_CMI159C
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
  
  
 
0.910
CYME_CMS492C
Uncharacterized protein.
    
 0.895
CYME_CMG190C
RING-type domain-containing protein.
    
 0.858
CYME_CMB078C
Similar to suppressor of lin12 SEL1.
   
 0.722
CYME_CMG180C
Similar to key negative regulator of the Notch pathway SEL1L.
   
 0.722
CYME_CML244C
UBX domain-containing protein.
    
 
 0.705
CYME_CMT579C
Luminal binding protein BiP; Belongs to the heat shock protein 70 family.
   
 0.684
CYME_CMK008C
Similar to ubiquitin fusion-degradation protein 1.
   
 
 0.672
CYME_CMH273C
Similar to nuclear import protein NPL4.
    
 
 0.666
CYME_CMK054C
Nucleotide excision repair protein yeast rad23/ human HHR23A homolog.
     
 0.597
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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