STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMM071CUncharacterized protein. (1122 aa)    
Predicted Functional Partners:
CYME_CML313C
Similar to ATP-dependent RNA helicase.
   
 
 0.988
CYME_CMR018C
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 
 0.865
CYME_CMT427C
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.846
CYME_CMH022C
RuvB-like helicase; Belongs to the RuvB family.
    
 
 0.785
CYME_CMN075C
Similar to DNA damage checkpoint kinase RAD3; Belongs to the PI3/PI4-kinase family.
    
 
 0.737
CYME_CMO046C
Similar to PCAF histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family.
   
 
 0.698
CYME_CMH034C
Probable DNA repair endonuclease XPF.
   
 
 0.587
CYME_CMH260C
WD-repeat protein.
   
 
 0.565
CYME_CMH109C
Raptor.
    
 
 0.502
CYME_CML171C
WD_REPEATS_REGION domain-containing protein.
    
 
 0.439
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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