Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYME_CMB030C | CYME_CMD026C | M1VEE4 | M1VF13 | WD_REPEATS_REGION domain-containing protein. | RNA polymerase II subunit G. | 0.781 |
CYME_CMB030C | CYME_CMG169C | M1VEE4 | M1V4U3 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.792 |
CYME_CMB030C | CYME_CMH017C | M1VEE4 | M1VBK5 | WD_REPEATS_REGION domain-containing protein. | RNA polymerase I, II, III common subunit. | 0.781 |
CYME_CMB030C | CYME_CMO092C | M1VEE4 | M1V9F3 | WD_REPEATS_REGION domain-containing protein. | DNA repair and recombination protein RAD26. | 0.965 |
CYME_CMB030C | CYME_CMP043C | M1VEE4 | M1UUX6 | WD_REPEATS_REGION domain-containing protein. | RNA polymerase II third large subunit. | 0.783 |
CYME_CMB030C | CYME_CMR224C | M1VEE4 | A0A125YLI6 | WD_REPEATS_REGION domain-containing protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.695 |
CYME_CMB030C | CYME_CMR264C | M1VEE4 | M1VB67 | WD_REPEATS_REGION domain-containing protein. | UV-damaged DNA binding protein. | 0.997 |
CYME_CMB030C | CYME_CMS236C | M1VEE4 | M1VLZ4 | WD_REPEATS_REGION domain-containing protein. | Probable excision repair protein ERCC5. | 0.416 |
CYME_CMB030C | CYME_CMT501C | M1VEE4 | M1VMQ4 | WD_REPEATS_REGION domain-containing protein. | Probable transcription elongation factor S-II. | 0.536 |
CYME_CMB030C | CYME_CMT583C | M1VEE4 | M1VIP7 | WD_REPEATS_REGION domain-containing protein. | RNA polymerase II subunit. | 0.785 |
CYME_CMD026C | CYME_CMB030C | M1VF13 | M1VEE4 | RNA polymerase II subunit G. | WD_REPEATS_REGION domain-containing protein. | 0.781 |
CYME_CMD026C | CYME_CMG169C | M1VF13 | M1V4U3 | RNA polymerase II subunit G. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | 0.999 |
CYME_CMD026C | CYME_CMH017C | M1VF13 | M1VBK5 | RNA polymerase II subunit G. | RNA polymerase I, II, III common subunit. | 0.999 |
CYME_CMD026C | CYME_CMO092C | M1VF13 | M1V9F3 | RNA polymerase II subunit G. | DNA repair and recombination protein RAD26. | 0.886 |
CYME_CMD026C | CYME_CMP043C | M1VF13 | M1UUX6 | RNA polymerase II subunit G. | RNA polymerase II third large subunit. | 0.999 |
CYME_CMD026C | CYME_CMR224C | M1VF13 | A0A125YLI6 | RNA polymerase II subunit G. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
CYME_CMD026C | CYME_CMR264C | M1VF13 | M1VB67 | RNA polymerase II subunit G. | UV-damaged DNA binding protein. | 0.790 |
CYME_CMD026C | CYME_CMT501C | M1VF13 | M1VMQ4 | RNA polymerase II subunit G. | Probable transcription elongation factor S-II. | 0.981 |
CYME_CMD026C | CYME_CMT583C | M1VF13 | M1VIP7 | RNA polymerase II subunit G. | RNA polymerase II subunit. | 0.999 |
CYME_CMG169C | CYME_CMB030C | M1V4U3 | M1VEE4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. | WD_REPEATS_REGION domain-containing protein. | 0.792 |
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