STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMO347CMYB-related protein. (638 aa)    
Predicted Functional Partners:
CYME_CMT030C
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
CYME_CMN166C
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.994
CYME_CMN125C
40S ribosomal protein S27A, ubiquitin fusion protein.
   
 0.994
CYME_CMM224C
PI3K/PI4K domain-containing protein.
    
 0.994
CYME_CMN174C
Histone H2A; Belongs to the histone H2A family.
    
  0.990
CYME_CMN170C
Histone H2A; Belongs to the histone H2A family.
    
  0.990
CYME_CMK296C
Ubiquitin with short C-terminal extension.
   
  0.988
CYME_CMC045C
60S ribosomal protein L40, ubiquitin fusion protein.
   
  0.988
CYME_CMS256C
Similar to transcriptional activator GCN5, a bromodomain protein.
    
 0.987
CYME_CMS331C
Similar to inner centromere protein.
    
 0.987
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.