Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYME_CMC013C | CYME_CMC138C | M1UNJ0 | M1V6M2 | 26S proteasome regulatory subunit RPN11. | Similar to FUSCA protein FUS6. | 0.712 |
CYME_CMC013C | CYME_CML042C | M1UNJ0 | M1V5H3 | 26S proteasome regulatory subunit RPN11. | Ubiquitin-like protein Rub1. | 0.723 |
CYME_CMC013C | CYME_CMN113C | M1UNJ0 | M1V962 | 26S proteasome regulatory subunit RPN11. | Cullin 4; Belongs to the cullin family. | 0.559 |
CYME_CMC013C | CYME_CMQ353C | M1UNJ0 | M1VAP2 | 26S proteasome regulatory subunit RPN11. | Ring-box protein 1. | 0.646 |
CYME_CMC013C | CYME_CMR159C | M1UNJ0 | M1VB25 | 26S proteasome regulatory subunit RPN11. | Similar to COP9 signalosome subunit Csn2. | 0.725 |
CYME_CMC013C | CYME_CMR264C | M1UNJ0 | M1VB67 | 26S proteasome regulatory subunit RPN11. | UV-damaged DNA binding protein. | 0.589 |
CYME_CMC013C | CYME_CMT431C | M1UNJ0 | M1VCU9 | 26S proteasome regulatory subunit RPN11. | 26S proteasome regulatory subunit RPN8. | 0.946 |
CYME_CMC138C | CYME_CMC013C | M1V6M2 | M1UNJ0 | Similar to FUSCA protein FUS6. | 26S proteasome regulatory subunit RPN11. | 0.712 |
CYME_CMC138C | CYME_CML042C | M1V6M2 | M1V5H3 | Similar to FUSCA protein FUS6. | Ubiquitin-like protein Rub1. | 0.920 |
CYME_CMC138C | CYME_CMN059C | M1V6M2 | M1UTP7 | Similar to FUSCA protein FUS6. | Similar to COP9 signalosome subunit Csn5. | 0.999 |
CYME_CMC138C | CYME_CMN113C | M1V6M2 | M1V962 | Similar to FUSCA protein FUS6. | Cullin 4; Belongs to the cullin family. | 0.840 |
CYME_CMC138C | CYME_CMO347C | M1V6M2 | M1V9P6 | Similar to FUSCA protein FUS6. | MYB-related protein. | 0.718 |
CYME_CMC138C | CYME_CMP265C | M1V6M2 | M1UVB4 | Similar to FUSCA protein FUS6. | Eukaryotic translation initiation factor eIF-3 subunit F. | 0.711 |
CYME_CMC138C | CYME_CMQ353C | M1V6M2 | M1VAP2 | Similar to FUSCA protein FUS6. | Ring-box protein 1. | 0.869 |
CYME_CMC138C | CYME_CMR159C | M1V6M2 | M1VB25 | Similar to FUSCA protein FUS6. | Similar to COP9 signalosome subunit Csn2. | 0.999 |
CYME_CMC138C | CYME_CMR264C | M1V6M2 | M1VB67 | Similar to FUSCA protein FUS6. | UV-damaged DNA binding protein. | 0.892 |
CYME_CMC138C | CYME_CMT431C | M1V6M2 | M1VCU9 | Similar to FUSCA protein FUS6. | 26S proteasome regulatory subunit RPN8. | 0.728 |
CYME_CML042C | CYME_CMC013C | M1V5H3 | M1UNJ0 | Ubiquitin-like protein Rub1. | 26S proteasome regulatory subunit RPN11. | 0.723 |
CYME_CML042C | CYME_CMC138C | M1V5H3 | M1V6M2 | Ubiquitin-like protein Rub1. | Similar to FUSCA protein FUS6. | 0.920 |
CYME_CML042C | CYME_CMN059C | M1V5H3 | M1UTP7 | Ubiquitin-like protein Rub1. | Similar to COP9 signalosome subunit Csn5. | 0.942 |
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