Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYME_CME023C | CYME_CMI233C | M1V4C9 | M1VH26 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Glutamine synthetase. | 0.465 |
CYME_CME023C | CYME_CMJ084C | M1V4C9 | M1URH3 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Phosphoribosylamine--glycine ligase. | 0.977 |
CYME_CME023C | CYME_CML194C | M1V4C9 | M1VIB8 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.973 |
CYME_CME023C | CYME_CMN264C | M1V4C9 | M1UU52 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.908 |
CYME_CME023C | CYME_CMQ211C | M1V4C9 | M1UVP8 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.997 |
CYME_CME023C | CYME_CMQ365C | M1V4C9 | M1V6I8 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Phosphoribosylformylglycinamidine synthase. | 0.970 |
CYME_CME023C | CYME_CMR240C | M1V4C9 | M1VB58 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.971 |
CYME_CME023C | CYME_CMT058C | M1V4C9 | M1UXB1 | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | Phosphoribosylglycinamide formyltransferase. | 0.972 |
CYME_CMI233C | CYME_CME023C | M1VH26 | M1V4C9 | Glutamine synthetase. | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | 0.465 |
CYME_CMI233C | CYME_CML055C | M1VH26 | M1VI31 | Glutamine synthetase. | Carbamoyl-phosphate synthase, pyrimidine-specific, large chain. | 0.930 |
CYME_CMI233C | CYME_CML194C | M1VH26 | M1VIB8 | Glutamine synthetase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.420 |
CYME_CMI233C | CYME_CMQ211C | M1VH26 | M1UVP8 | Glutamine synthetase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.479 |
CYME_CMI233C | CYME_CMQ255C | M1VH26 | M1UVS2 | Glutamine synthetase. | CAD complex. | 0.930 |
CYME_CMI233C | CYME_CMR240C | M1VH26 | M1VB58 | Glutamine synthetase. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.944 |
CYME_CMJ084C | CYME_CME023C | M1URH3 | M1V4C9 | Phosphoribosylamine--glycine ligase. | Phosphoribosylaminoimidazole-succinocarboxamide synthase. | 0.977 |
CYME_CMJ084C | CYME_CML194C | M1URH3 | M1VIB8 | Phosphoribosylamine--glycine ligase. | Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase. | 0.922 |
CYME_CMJ084C | CYME_CMN264C | M1URH3 | M1UU52 | Phosphoribosylamine--glycine ligase. | Phosphoribosylformylglycinamidine cyclo-ligase. | 0.949 |
CYME_CMJ084C | CYME_CMQ211C | M1URH3 | M1UVP8 | Phosphoribosylamine--glycine ligase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.886 |
CYME_CMJ084C | CYME_CMQ365C | M1URH3 | M1V6I8 | Phosphoribosylamine--glycine ligase. | Phosphoribosylformylglycinamidine synthase. | 0.873 |
CYME_CMJ084C | CYME_CMR240C | M1URH3 | M1VB58 | Phosphoribosylamine--glycine ligase. | Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.992 |
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