STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMG202CPlus3 domain-containing protein. (746 aa)    
Predicted Functional Partners:
CYME_CMF035C
Uncharacterized protein.
   
 0.993
CYME_CMJ135C
CDC73_C domain-containing protein.
   
 0.992
CYME_CMS034C
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
   
 0.987
CYME_CMD151C
Similar to transcription initiation protein SPT5.
    
 
 0.977
CYME_CMS358C
Chromatin-specific transcription elongation factor.
   
 0.970
CYME_CMP043C
RNA polymerase II third large subunit.
    
 
 0.871
CYME_CMN145C
Histone H2B; Belongs to the histone H2B family.
    
 0.848
CYME_CMJ060C
Spt4 domain-containing protein.
    
 
 0.846
CYME_CMB144C
Similar to suppressor of Ty 6 Spt6.
   
 
 0.839
CYME_CMQ056C
RNA polymerase I, II, III common subunit.
    
   0.776
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.