STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMS331CSimilar to inner centromere protein. (1083 aa)    
Predicted Functional Partners:
CYME_CMO347C
MYB-related protein.
    
 0.987
CYME_CMO165C
TATA-box binding protein-associated factor 9.
   
 0.863
CYME_CMO046C
Similar to PCAF histone acetylase complex subunit; Belongs to the PI3/PI4-kinase family.
    
 0.862
CYME_CMK132C
Probable transcription initiation factor TFIID, subunit TAF10.
    
 0.861
CYME_CMH182C
Similar to ubiquitin specific protease; Belongs to the peptidase C19 family.
    
 0.836
CYME_CMN166C
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.826
CYME_CMF095C
TATA-box binding protein.
    
 0.784
CYME_CMS144C
TATA-box binding protein-associated factor 12.
    
 0.760
CYME_CMK081C
TATA-box binding protein-associated factor 6.
    
 0.755
CYME_CMS495C
Probable transcriptional adaptor ADA2.
   
 0.707
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.