STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMT122CATP-dependent Hsl protease ATP-binding subunit HslU, heat shock protein HslU. (544 aa)    
Predicted Functional Partners:
CYME_CMJ169C
Probable heat shock protein hslV, proteasome-related peptidase subunit.
  
  
  0.695
CYME_CMS440C
ATP-dependent Clp protease proteolytic subunit.
  
 
 0.561
CYME_CMQ045C
ATP-dependent Clp protease proteolytic subunit.
 
 
 0.561
CYME_CMJ141C
ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.
  
 
 0.561
CYME_CML155C
ATP-dependent Clp protease proteolytic subunit.
 
 
 0.561
CYME_CMN237C
ATP-dependent Clp protease proteolytic subunit.
 
 
 0.561
CYME_CMQ097C
Lon protease homolog; Belongs to the peptidase S16 family.
  
 
 0.545
CYME_CMI157C
ATP-dependent zinc protease.
   
  
 0.497
CYME_CMM072C
Sigma subunit for chloroplast RNA polymerase.
  
  
 0.439
CYME_CMS462C
Bifunctional dihydrofolate reductase-thymidylate synthase; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism; In the C-terminal section; belongs to the thymidylate synthase family.
     
 0.408
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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