STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CML073CSimilar to actin-related protein; Belongs to the actin family. (359 aa)    
Predicted Functional Partners:
CYME_CMO347C
MYB-related protein.
    
 0.880
CYME_CMF095C
TATA-box binding protein.
   
 0.806
CYME_CMI227C
Probable G2/mitotic-specific cyclin 1; Belongs to the cyclin family.
   
 
 0.789
CYME_CMN147C
Actin depolymerizing factor; Belongs to the actin-binding proteins ADF family.
   
 
 0.754
CYME_CMR270C
Similar to actin-related protein Arp4; Belongs to the actin family.
 
 
0.745
CYME_CMT559C
Similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b.
   
 0.740
CYME_CMJ223C
Similar to actin-related protein; Belongs to the actin family.
  
 
0.739
CYME_CMH022C
RuvB-like helicase; Belongs to the RuvB family.
    
 0.738
CYME_CMN263C
Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain.
  
 0.736
CYME_CMP220C
Profilin; Belongs to the profilin family.
   
 0.732
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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