STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CML128CtRNA nucleotidyltransferase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. (752 aa)    
Predicted Functional Partners:
CYME_CMC080C
Similar to biotin holocarboxylase synthetase.
  
  
 0.635
CYME_CMT315C
Probable oligoribonuclease, mitochondrial.
     
 0.535
CYME_CMH138C
Pantoate--beta-alanine ligase.
     
 0.513
CYME_CMS475C
tRNA isopentenyltransferase; Belongs to the IPP transferase family.
  
  
 0.510
CYME_CMQ324C
Polyribonucleotide nucleotidyltransferase.
  
 
 0.505
CYME_CMH146C
Polyribonucleotide nucleotidyltransferase.
  
 
 0.505
CYME_CMS468C
Similar to DRAP deaminase involved in riboflavin biosynthesis.
  
  
 0.502
CYME_CMT463C
TRUD domain-containing protein.
   
  
 0.485
CYME_CMM072C
Sigma subunit for chloroplast RNA polymerase.
     
 0.455
CYME_CMJ256C
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
  
  
 0.444
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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