STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMN074CBox C/D snoRNP rRNA methylase component fibrillarin. (356 aa)    
Predicted Functional Partners:
CYME_CMP335C
Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family.
   
 0.999
CYME_CMR267C
Similar to U3 snoRNP-associated 55-kDa protein RRP9.
   
 0.999
CYME_CMT605C
Box C/D snoRNP component Nop58.
   
 0.999
CYME_CMT453C
Similar to nucleolar RNA-associated protein NRAP.
   
 0.997
CYME_CMF157C
Probable U3 snoRNP component Utp7p.
  
 
 0.995
CYME_CMS199C
U3 snoRNP component PWP2.
   
 
 0.995
CYME_CMO193C
Uncharacterized protein.
   
 0.995
CYME_CMQ382C
Similar to U3 snoRNP component Utp15p.
   
 0.995
CYME_CMG105C
Probable WD-repeat membrane protein.
   
 
 0.994
CYME_CMT444C
WD_REPEATS_REGION domain-containing protein.
   
 0.994
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.