Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYME_CMC063C | CYME_CMF157C | M1VA91 | M1V760 | Probable ribosome biogenesis protein NEP1. | Probable U3 snoRNP component Utp7p. | 0.994 |
CYME_CMC063C | CYME_CMI132C | M1VA91 | M1VGX4 | Probable ribosome biogenesis protein NEP1. | U3 snoRNP component Sof1p. | 0.995 |
CYME_CMC063C | CYME_CMN068C | M1VA91 | M1V948 | Probable ribosome biogenesis protein NEP1. | Similar to U3 snoRNP protein Utp20p. | 0.994 |
CYME_CMC063C | CYME_CMO023C | M1VA91 | M1VJE1 | Probable ribosome biogenesis protein NEP1. | Similar to rRNA biogenesis protein rrp5 homolog multiple S1 rna binding domain protein. | 0.982 |
CYME_CMC063C | CYME_CMP203C | M1VA91 | M1VFR7 | Probable ribosome biogenesis protein NEP1. | CBF domain-containing protein. | 0.999 |
CYME_CMC063C | CYME_CMQ382C | M1VA91 | M1VKW8 | Probable ribosome biogenesis protein NEP1. | Similar to U3 snoRNP component Utp15p. | 0.985 |
CYME_CMC063C | CYME_CMR456C | M1VA91 | M1V6Y4 | Probable ribosome biogenesis protein NEP1. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
CYME_CMC063C | CYME_CMT211C | M1VA91 | M1V7L4 | Probable ribosome biogenesis protein NEP1. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.995 |
CYME_CMC063C | CYME_CMT432C | M1VA91 | M1V7T9 | Probable ribosome biogenesis protein NEP1. | Similar to charged amino acid rich leucine zipper factor-1. | 0.993 |
CYME_CMC063C | CYME_CMT444C | M1VA91 | M1UXW6 | Probable ribosome biogenesis protein NEP1. | WD_REPEATS_REGION domain-containing protein. | 0.975 |
CYME_CMF157C | CYME_CMC063C | M1V760 | M1VA91 | Probable U3 snoRNP component Utp7p. | Probable ribosome biogenesis protein NEP1. | 0.994 |
CYME_CMF157C | CYME_CMI132C | M1V760 | M1VGX4 | Probable U3 snoRNP component Utp7p. | U3 snoRNP component Sof1p. | 0.999 |
CYME_CMF157C | CYME_CMN068C | M1V760 | M1V948 | Probable U3 snoRNP component Utp7p. | Similar to U3 snoRNP protein Utp20p. | 0.999 |
CYME_CMF157C | CYME_CMO023C | M1V760 | M1VJE1 | Probable U3 snoRNP component Utp7p. | Similar to rRNA biogenesis protein rrp5 homolog multiple S1 rna binding domain protein. | 0.999 |
CYME_CMF157C | CYME_CMP203C | M1V760 | M1VFR7 | Probable U3 snoRNP component Utp7p. | CBF domain-containing protein. | 0.999 |
CYME_CMF157C | CYME_CMQ382C | M1V760 | M1VKW8 | Probable U3 snoRNP component Utp7p. | Similar to U3 snoRNP component Utp15p. | 0.997 |
CYME_CMF157C | CYME_CMR456C | M1V760 | M1V6Y4 | Probable U3 snoRNP component Utp7p. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
CYME_CMF157C | CYME_CMT211C | M1V760 | M1V7L4 | Probable U3 snoRNP component Utp7p. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.998 |
CYME_CMF157C | CYME_CMT432C | M1V760 | M1V7T9 | Probable U3 snoRNP component Utp7p. | Similar to charged amino acid rich leucine zipper factor-1. | 0.999 |
CYME_CMF157C | CYME_CMT444C | M1V760 | M1UXW6 | Probable U3 snoRNP component Utp7p. | WD_REPEATS_REGION domain-containing protein. | 0.998 |
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