STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMQ089CProbable protease; Belongs to the peptidase M16 family. (1050 aa)    
Predicted Functional Partners:
CYME_CMP152C
Cytochrome c reductase cytochrome c1 subunit.
   
 0.892
CYME_CMK031C
Cytochrome c reductase subunit 7(VI).
   
 0.855
CYME_CMJ185C
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.
   
 
 0.767
CYME_CMS223C
NADH dehydrogenase I iron-sulfur protein 23kDa subunit.
  
 
 0.762
CYME_CML098C
Cytochrome c oxidase subunit Vb.
   
 0.753
CYME_CMG215C
Cytochrome b-c1 complex subunit 6; This is a component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain. This protein may mediate formation of the complex between cytochromes c and c1. Belongs to the UQCRH/QCR6 family.
   
 0.745
CYME_CMQ200C
NADH dehydrogenase I iron-sulfur protein 30kDa subunit; Belongs to the complex I 30 kDa subunit family.
   
 
 0.735
CYME_CMJ211C
NADH dehydrogenase I iron-sulfur protein 49kDa subunit; Belongs to the complex I 49 kDa subunit family.
   
 
 0.725
CYME_CMR188C
NADH dehydrogenase I flavoprotein 24kDa subunit.
   
 
 0.715
CYME_CMO080C
NADH dehydrogenase I iron-sulfur protein 18kDa subunit.
   
 
 0.704
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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