STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMT407CtRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family. (280 aa)    
Predicted Functional Partners:
CYME_CMO159C
Uncharacterized protein.
   
 0.951
CYME_CMB123C
Similar to tRNA (Adenine-N1-)-methyltransferase catalytic subunit TRMT61A.
  
 
 0.688
CYME_CMJ252C
Probable rRNA methyltransferase pmt2.
   
 
 0.641
CYME_CMM044C
Box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin.
  
 
 0.608
CYME_CMF022C
tRNA pseudouridine 55 synthase.
  
 
 0.608
CYME_CMN069C
SAM-dependent MTase TRM10-type domain-containing protein.
   
 
 0.578
CYME_CMJ256C
Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position.
   
  
 0.570
CYME_CMT463C
TRUD domain-containing protein.
  
 
 0.554
CYME_CML137C
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
   0.553
CYME_CMO215C
Similar to RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
  
  
 0.538
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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