Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CYME_CME059C | CYME_CMM111C | M1VFI7 | M1UT98 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Eukaryotic petide chain release factor eRF subunit 1. | 0.621 |
CYME_CME059C | CYME_CMO160C | M1VFI7 | M1VJK6 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Similar to archease. | 0.868 |
CYME_CME059C | CYME_CMQ312C | M1VFI7 | M1V6G9 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | Uncharacterized protein. | 0.888 |
CYME_CME059C | CYME_CMS248C | M1VFI7 | M1V789 | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | DEAD/H box protein. | 0.811 |
CYME_CMM111C | CYME_CME059C | M1UT98 | M1VFI7 | Eukaryotic petide chain release factor eRF subunit 1. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.621 |
CYME_CMM111C | CYME_CMO160C | M1UT98 | M1VJK6 | Eukaryotic petide chain release factor eRF subunit 1. | Similar to archease. | 0.695 |
CYME_CMO160C | CYME_CME059C | M1VJK6 | M1VFI7 | Similar to archease. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.868 |
CYME_CMO160C | CYME_CMM111C | M1VJK6 | M1UT98 | Similar to archease. | Eukaryotic petide chain release factor eRF subunit 1. | 0.695 |
CYME_CMO160C | CYME_CMQ312C | M1VJK6 | M1V6G9 | Similar to archease. | Uncharacterized protein. | 0.428 |
CYME_CMO160C | CYME_CMS248C | M1VJK6 | M1V789 | Similar to archease. | DEAD/H box protein. | 0.566 |
CYME_CMQ312C | CYME_CME059C | M1V6G9 | M1VFI7 | Uncharacterized protein. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.888 |
CYME_CMQ312C | CYME_CMO160C | M1V6G9 | M1VJK6 | Uncharacterized protein. | Similar to archease. | 0.428 |
CYME_CMS248C | CYME_CME059C | M1V789 | M1VFI7 | DEAD/H box protein. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.811 |
CYME_CMS248C | CYME_CMO160C | M1V789 | M1VJK6 | DEAD/H box protein. | Similar to archease. | 0.566 |