STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMQ035CSimilar to exosome complex exonuclease RRP45. (519 aa)    
Predicted Functional Partners:
CYME_CMT376C
Exosome complex exonuclease Rrp4.
   
 0.999
CYME_CMI017C
Similar to exosome complex exonuclease RRP40.
   
 0.999
CYME_CML180C
Similar to 3'-5' exoribonuclease CSL4.
   
 0.999
CYME_CMT635C
RNase_PH domain-containing protein.
   
 0.999
CYME_CMA072C
Probable nuclear exosomal RNA helicase MTR4.
   
 0.995
CYME_CMF177C
Similar to polymyositis-scleroderma overlap syndrome associated autoantigen.
   
 0.995
CYME_CMF059C
Uncharacterized protein.
   
   0.979
CYME_CMB091C
Similar to eukaryotic translation elongation factor 1 alpha.
   
 0.945
CYME_CMI132C
U3 snoRNP component Sof1p.
   
  0.913
CYME_CMO193C
Uncharacterized protein.
   
 0.895
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.