STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMS109CSimilar to geranylgeranyl hydrogenase. (515 aa)    
Predicted Functional Partners:
CYME_CMM189C
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
  
 0.826
CYME_CMM277C
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.733
CYME_CML193C
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
   
 
 0.733
CYME_CMS296C
Probable C-4 sterol methyl oxidase; Belongs to the sterol desaturase family.
   
 
 0.733
CYME_CMS319C
Cytochrome P450, family 51; Belongs to the cytochrome P450 family.
   
 
 0.713
CYME_CMR093C
Cytochrome P450; Belongs to the cytochrome P450 family.
   
 
 0.713
CYME_CMI029C
Probable C-14 sterol reductase.
   
 
 0.690
CYME_CMJ009C
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
   
  
 0.674
CYME_CMB062C
Isopentenyl-diphosphate delta isomerase.
   
  
 0.673
CYME_CMC055C
Probable lathosterol oxidase; Belongs to the sterol desaturase family.
   
 
 0.667
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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