STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYME_CMT546CC2H2-type domain-containing protein. (549 aa)    
Predicted Functional Partners:
CYME_CMT194C
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.867
CYME_CMQ345C
GTP-binding protein of Nug1 family.
   
 
 0.817
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
   
 
 0.799
CYME_CME046C
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
    
 
 0.742
CYME_CMI205C
60S ribosomal protein L24.
    
 
 0.722
CYME_CMM253C
60S ribosomal protein L3.
    
 
 0.693
CYME_CMS080C
60S ribosomal protein L22.
    
   0.687
CYME_CMK273C
60S ribosomal protein L23A; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.685
CYME_CMQ463C
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.684
CYME_CMT160C
60S ribosomal protein L24 homolog.
   
 
 0.676
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.