STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ycf29OmpR-like transcriptional regulator. (190 aa)    
Predicted Functional Partners:
CYME_CMQ224C
Heat shock protein of Hsp90 family.
    
 0.994
CYME_CMA061C
Heat shock protein of Hsp90 family.
    
 0.994
CYME_CMP239C
14-3-3 protein; Belongs to the 14-3-3 family.
    
 0.993
CYME_CMP145C
Heat shock protein Hsp70, cytosolic; Belongs to the heat shock protein 70 family.
    
 0.993
CYME_CMS295C
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.990
CYME_CMQ039C
MAP kinase.
   
 0.990
CYME_CMQ209C
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 0.990
Rca-2
Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic; Required for the expression of ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCo). ATPase involved in the activation of red-type RuBisCo, which tends to form inactive complexes with its substrate ribulose 1,5-bisphosphate (RuBP). Catalyzes the release of RuBP from inhibited RuBisCo in an ATP-dependent manner. Activation of RuBisCO involves the ATP-dependent carboxylation of the epsilon-amino group of lysine leading to a carbamate structure. The nuclear- encoded subunit plays a more critical role in activase fun [...]
    
 0.990
CYME_CMH226C
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.989
CYME_CMR018C
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.989
Your Current Organism:
Cyanidioschyzon merolae
NCBI taxonomy Id: 280699
Other names: C. merolae strain 10D, Cyanidioschyzon merolae strain 10D
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