Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFY46181.1 | AFY46561.1 | Nos7524_0259 | Nos7524_0651 | ATPase component of ABC transporters with duplicated ATPase domain; PFAM: Archaeal ATPase; Tetratricopeptide repeat. | PFAM: Alkaline phosphatase. | 0.538 |
AFY46354.1 | AFY46561.1 | Nos7524_0439 | Nos7524_0651 | PFAM: Glycosyl transferase family 2. | PFAM: Alkaline phosphatase. | 0.602 |
AFY46559.1 | AFY46560.1 | Nos7524_0649 | Nos7524_0650 | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | Hypothetical protein. | 0.773 |
AFY46559.1 | AFY46561.1 | Nos7524_0649 | Nos7524_0651 | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | PFAM: Alkaline phosphatase. | 0.700 |
AFY46559.1 | AFY46562.1 | Nos7524_0649 | Nos7524_0652 | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | PEP-CTERM putative exosortase interaction domain-containing protein; TIGRFAM: PEP-CTERM protein sorting domain. | 0.528 |
AFY46560.1 | AFY46559.1 | Nos7524_0650 | Nos7524_0649 | Hypothetical protein. | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.773 |
AFY46560.1 | AFY46561.1 | Nos7524_0650 | Nos7524_0651 | Hypothetical protein. | PFAM: Alkaline phosphatase. | 0.655 |
AFY46560.1 | AFY46562.1 | Nos7524_0650 | Nos7524_0652 | Hypothetical protein. | PEP-CTERM putative exosortase interaction domain-containing protein; TIGRFAM: PEP-CTERM protein sorting domain. | 0.528 |
AFY46561.1 | AFY46181.1 | Nos7524_0651 | Nos7524_0259 | PFAM: Alkaline phosphatase. | ATPase component of ABC transporters with duplicated ATPase domain; PFAM: Archaeal ATPase; Tetratricopeptide repeat. | 0.538 |
AFY46561.1 | AFY46354.1 | Nos7524_0651 | Nos7524_0439 | PFAM: Alkaline phosphatase. | PFAM: Glycosyl transferase family 2. | 0.602 |
AFY46561.1 | AFY46559.1 | Nos7524_0651 | Nos7524_0649 | PFAM: Alkaline phosphatase. | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.700 |
AFY46561.1 | AFY46560.1 | Nos7524_0651 | Nos7524_0650 | PFAM: Alkaline phosphatase. | Hypothetical protein. | 0.655 |
AFY46561.1 | AFY46562.1 | Nos7524_0651 | Nos7524_0652 | PFAM: Alkaline phosphatase. | PEP-CTERM putative exosortase interaction domain-containing protein; TIGRFAM: PEP-CTERM protein sorting domain. | 0.626 |
AFY46561.1 | AFY47640.1 | Nos7524_0651 | Nos7524_1774 | PFAM: Alkaline phosphatase. | 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase); PFAM: Phytase; Glycerophosphoryl diester phosphodiesterase family; Calx-beta domain. | 0.581 |
AFY46561.1 | nadK | Nos7524_0651 | Nos7524_3536 | PFAM: Alkaline phosphatase. | Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.503 |
AFY46561.1 | nadK-2 | Nos7524_0651 | Nos7524_3716 | PFAM: Alkaline phosphatase. | Putative sugar kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.503 |
AFY46561.1 | secA | Nos7524_0651 | Nos7524_1569 | PFAM: Alkaline phosphatase. | Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family. | 0.739 |
AFY46561.1 | tig | Nos7524_0651 | Nos7524_3029 | PFAM: Alkaline phosphatase. | Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily. | 0.709 |
AFY46562.1 | AFY46559.1 | Nos7524_0652 | Nos7524_0649 | PEP-CTERM putative exosortase interaction domain-containing protein; TIGRFAM: PEP-CTERM protein sorting domain. | PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter. | 0.528 |
AFY46562.1 | AFY46560.1 | Nos7524_0652 | Nos7524_0650 | PEP-CTERM putative exosortase interaction domain-containing protein; TIGRFAM: PEP-CTERM protein sorting domain. | Hypothetical protein. | 0.528 |
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