STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY46902.1PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; CpcD/allophycocyanin linker domain. (421 aa)    
Predicted Functional Partners:
AFY46855.1
Ferredoxin, (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S].
  
 
 
 0.895
AFY46272.1
Ferredoxin, (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S].
  
 
 
 0.654
AFY46286.1
Ferredoxin; PFAM: 2Fe-2S iron-sulfur cluster binding domain.
  
 
 
 0.653
AFY50572.1
Ferredoxin, (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S].
  
 
 
 0.624
AFY49369.1
PFAM: Manganese-stabilising protein / photosystem II polypeptide.
  
   
 0.610
psaL
PFAM: Photosystem I reaction centre subunit XI.
  
   
 0.589
AFY47082.1
Ferredoxin, (2Fe-2S); PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: ferredoxin [2Fe-2S].
  
 
 
 0.570
AFY45981.1
PsaD; PFAM: PsaD.
  
   
 0.566
AFY49398.1
Hypothetical protein.
  
     0.552
AFY48883.1
PFAM: Protein of unknown function (DUF1092).
  
     0.541
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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