STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY47016.1Hypothetical protein. (456 aa)    
Predicted Functional Partners:
AFY47225.1
Hypothetical protein.
  
     0.751
AFY47104.1
Hypothetical protein.
  
     0.730
AFY46386.1
PFAM: dUTPase; TIGRFAM: deoxycytidine triphosphate deaminase.
  
     0.580
AFY48828.1
PFAM: Bacterial regulatory proteins, luxR family.
  
     0.572
AFY48569.1
Hypothetical protein; PFAM: Methyltransferase domain.
  
     0.570
AFY46878.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase.
  
     0.564
AFY50772.1
Putative NTPase (NACHT family); PFAM: Formylglycine-generating sulfatase enzyme; GUN4-like; NACHT domain.
  
     0.499
AFY47015.1
PFAM: Ribulose bisphosphate carboxylase, small chain.
       0.488
AFY46810.1
Transposase family protein; PFAM: Transposase Tn5 dimerisation domain; Transposase DDE domain.
  
     0.458
AFY48012.1
Hypothetical protein.
  
     0.449
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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