STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nspVMHypothetical protein; This methylase recognizes the double-stranded sequence TTCGAA, and methylates it on a yet unknown base to protect it against the NspV endonuclease. (480 aa)    
Predicted Functional Partners:
nspVR
Hypothetical protein; Recognizes the double-stranded sequence TTCGAA and cleaves after T-2.
 
    0.951
AFY50472.1
Hypothetical protein.
  
     0.639
AFY49567.1
PFAM: Restriction endonuclease BsobI.
  
     0.604
rsmI
Putative S-adenosylmethionine-dependent methyltransferase, YraL family; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
  
  
 0.499
AFY48487.1
Hypothetical protein.
  
     0.489
AFY49952.1
Hypothetical protein; PFAM: Oxidoreductase molybdopterin binding domain.
  
     0.456
AFY48045.1
Hypothetical protein.
  
     0.439
AFY49568.1
Hypothetical protein.
  
     0.426
AFY50420.1
PFAM: Protein of unknown function (DUF433).
  
     0.424
AFY48951.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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