STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY47144.1Hypothetical protein. (142 aa)    
Predicted Functional Partners:
AFY47143.1
Hypothetical protein.
       0.787
AFY47145.1
Hypothetical protein.
       0.718
AFY47146.1
PFAM: Phage tail protein (Tail_P2_I); TIGRFAM: phage tail protein domain; phage tail protein, P2 protein I family.
       0.686
AFY47147.1
PFAM: Baseplate J-like protein.
       0.686
AFY47150.1
Hypothetical protein; PFAM: Phage-related baseplate assembly protein.
       0.595
AFY47149.1
Phage baseplate assembly protein W; PFAM: Gene 25-like lysozyme.
       0.593
AFY47148.1
PFAM: Baseplate J-like protein; TIGRFAM: conserved hypothetical protein, phage tail-like region.
       0.578
AFY47151.1
Phage protein D; PFAM: Phage late control gene D protein (GPD).
       0.573
AFY47152.1
LysM domain-containing protein; PFAM: LysM domain.
       0.570
AFY47153.1
Hypothetical protein.
       0.570
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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