STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY47448.1PFAM: ATPase family associated with various cellular activities (AAA). (327 aa)    
Predicted Functional Partners:
AFY48492.1
PFAM: Protein of unknown function DUF58.
 
  
 0.590
AFY47446.1
Cytotoxic translational repressor of toxin-antitoxin stability system; PFAM: Protein of unknown function (DUF1044).
       0.576
AFY47447.1
Hypothetical protein.
       0.576
AFY47272.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
 
   
 0.558
AFY47449.1
PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; Belongs to the ribF family.
       0.513
AFY51227.1
PFAM: Orn/Lys/Arg decarboxylase, C-terminal domain; Orn/Lys/Arg decarboxylase, major domain.
   
 
 0.467
AFY47445.1
Putative periplasmic protein; PFAM: Dihaem cytochrome c.
       0.435
AFY50454.1
PFAM: Malic enzyme, NAD binding domain; ACT domain; Malic enzyme, N-terminal domain.
  
    0.404
AFY49651.1
PFAM: Protein of unknown function DUF58.
 
  
 0.402
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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