STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY48007.1Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; PFAM: TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes. (521 aa)    
Predicted Functional Partners:
AFY48008.1
ABC-type Fe3+-hydroxamate transport system, periplasmic component; PFAM: Periplasmic binding protein.
 
   
 0.824
AFY47159.1
Hypothetical protein.
  
 
 0.804
AFY48750.1
TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
 
 
 0.784
AFY51142.1
Hemoglobin/transferrin/lactoferrin receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent heme/hemoglobin receptor family protein; TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein.
  
  
 0.773
AFY48006.1
DNA-binding domain-containing protein, AraC-type.
 
   
 0.733
AFY49162.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
   
  
 0.661
AFY46200.1
Acyl carrier protein; PFAM: Phosphopantetheine attachment site.
   
  
 0.649
AFY47242.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site; Thioesterase domain; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain.
   
  
 0.631
AFY48002.1
DNA-binding domain-containing protein, AraC-type.
 
   
 0.613
AFY48009.1
Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes.
 
  
0.608
Your Current Organism:
Nostoc sp. PCC7524
NCBI taxonomy Id: 28072
Other names: N. sp. PCC 7524, NOSTOC SP. (STRAIN PCC 7524), Nostoc ATCC 29411, Nostoc ATCC29411, Nostoc PCC 7524, Nostoc PCC7524, Nostoc sp. (ATCC 29411), Nostoc sp. (PCC 7524), Nostoc sp. ATCC 29411, Nostoc sp. ATCC29411, Nostoc sp. PCC 7524
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